Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TERF1P3-201ENST00000505638 1227 ntBASIC16.24■□□□□ 0.19
SMAD6O43541 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.24■□□□□ 0.19
SMAD6O43541 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.24■□□□□ 0.19
SMAD6O43541 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.24■□□□□ 0.19
SMAD6O43541 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.24■□□□□ 0.19
SMAD6O43541 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.24■□□□□ 0.19
SMAD6O43541 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.24■□□□□ 0.19
SMAD6O43541 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.24■□□□□ 0.19
SMAD6O43541 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.24■□□□□ 0.19
SMAD6O43541 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.24■□□□□ 0.19
SMAD6O43541 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SMAD6O43541 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD6O43541 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.24■□□□□ 0.19
SMAD6O43541 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD6O43541 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.24■□□□□ 0.19
SMAD6O43541 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.24■□□□□ 0.19
SMAD6O43541 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
SMAD6O43541 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.24■□□□□ 0.19
SMAD6O43541 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD6O43541 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD6O43541 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD6O43541 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.24■□□□□ 0.19
SMAD6O43541 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD6O43541 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD6O43541 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD6O43541 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
SMAD6O43541 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD6O43541 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.23■□□□□ 0.19
SMAD6O43541 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.23■□□□□ 0.19
SMAD6O43541 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD6O43541 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
SMAD6O43541 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.23■□□□□ 0.19
SMAD6O43541 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.23■□□□□ 0.19
SMAD6O43541 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD6O43541 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD6O43541 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD6O43541 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD6O43541 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD6O43541 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD6O43541 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.23■□□□□ 0.19
SMAD6O43541 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD6O43541 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.23■□□□□ 0.19
SMAD6O43541 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.23■□□□□ 0.19
SMAD6O43541 SDHAP3-202ENST00000515467 728 ntBASIC16.23■□□□□ 0.19
SMAD6O43541 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.23■□□□□ 0.19
SMAD6O43541 AC025048.3-201ENST00000590609 569 ntBASIC16.23■□□□□ 0.19
SMAD6O43541 AC005702.4-201ENST00000618393 416 ntBASIC16.23■□□□□ 0.19
SMAD6O43541 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.23■□□□□ 0.19
SMAD6O43541 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
SMAD6O43541 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD6O43541 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.23■□□□□ 0.19
SMAD6O43541 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SMAD6O43541 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD6O43541 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD6O43541 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD6O43541 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMAD6O43541 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.23■□□□□ 0.19
SMAD6O43541 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SMAD6O43541 BTBD7P1-201ENST00000447253 1453 ntBASIC16.22■□□□□ 0.19
SMAD6O43541 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.22■□□□□ 0.19
SMAD6O43541 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD6O43541 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD6O43541 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.22■□□□□ 0.19
SMAD6O43541 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD6O43541 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SMAD6O43541 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD6O43541 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.22■□□□□ 0.19
SMAD6O43541 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.22■□□□□ 0.19
SMAD6O43541 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.22■□□□□ 0.19
SMAD6O43541 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD6O43541 AC018892.3-201ENST00000623986 2499 ntBASIC16.22■□□□□ 0.19
SMAD6O43541 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD6O43541 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SMAD6O43541 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD6O43541 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD6O43541 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.22■□□□□ 0.19
SMAD6O43541 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.22■□□□□ 0.19
SMAD6O43541 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.22■□□□□ 0.19
SMAD6O43541 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.22■□□□□ 0.19
SMAD6O43541 AC114501.2-201ENST00000439631 535 ntBASIC16.22■□□□□ 0.19
SMAD6O43541 GNAQP1-201ENST00000444815 1067 ntBASIC16.22■□□□□ 0.19
SMAD6O43541 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.22■□□□□ 0.19
SMAD6O43541 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD6O43541 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.22■□□□□ 0.19
SMAD6O43541 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.22■□□□□ 0.19
SMAD6O43541 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD6O43541 AC104794.3-201ENST00000566840 1248 ntBASIC16.22■□□□□ 0.19
SMAD6O43541 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.22■□□□□ 0.19
SMAD6O43541 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD6O43541 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD6O43541 AC009118.2-201ENST00000613275 655 ntBASIC16.22■□□□□ 0.19
SMAD6O43541 AC004461.2-201ENST00000629517 803 ntBASIC16.22■□□□□ 0.19
SMAD6O43541 TNRC18P3-201ENST00000441896 2691 ntBASIC16.22■□□□□ 0.19
SMAD6O43541 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD6O43541 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD6O43541 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD6O43541 CYP2T1P-202ENST00000641596 2535 ntBASIC16.22■□□□□ 0.19
SMAD6O43541 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMAD6O43541 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.22■□□□□ 0.19
SMAD6O43541 REXO1L1P-202ENST00000608646 1974 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms