Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.39■□□□□ 0.53
ATP2A1O14983 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.39■□□□□ 0.53
ATP2A1O14983 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.39■□□□□ 0.53
ATP2A1O14983 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.39■□□□□ 0.53
ATP2A1O14983 MIR6752-201ENST00000618442 71 ntBASIC18.39■□□□□ 0.53
ATP2A1O14983 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A1O14983 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ATP2A1O14983 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A1O14983 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
ATP2A1O14983 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A1O14983 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A1O14983 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A1O14983 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A1O14983 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A1O14983 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2A1O14983 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ATP2A1O14983 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A1O14983 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ATP2A1O14983 REXO1L8P-201ENST00000604378 1897 ntBASIC18.38■□□□□ 0.53
ATP2A1O14983 AC079776.1-201ENST00000401540 1152 ntBASIC18.38■□□□□ 0.53
ATP2A1O14983 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.38■□□□□ 0.53
ATP2A1O14983 ATP5G2P4-201ENST00000442175 420 ntBASIC18.38■□□□□ 0.53
ATP2A1O14983 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.38■□□□□ 0.53
ATP2A1O14983 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A1O14983 RN7SL837P-201ENST00000463010 287 ntBASIC18.38■□□□□ 0.53
ATP2A1O14983 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.38■□□□□ 0.53
ATP2A1O14983 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.38■□□□□ 0.53
ATP2A1O14983 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.38■□□□□ 0.53
ATP2A1O14983 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.38■□□□□ 0.53
ATP2A1O14983 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.38■□□□□ 0.53
ATP2A1O14983 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP2A1O14983 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A1O14983 ME2P1-201ENST00000426028 1970 ntBASIC18.38■□□□□ 0.53
ATP2A1O14983 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A1O14983 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP2A1O14983 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP2A1O14983 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A1O14983 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A1O14983 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ATP2A1O14983 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
ATP2A1O14983 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A1O14983 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ATP2A1O14983 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A1O14983 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A1O14983 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP2A1O14983 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A1O14983 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A1O14983 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A1O14983 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A1O14983 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A1O14983 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A1O14983 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
ATP2A1O14983 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A1O14983 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.37■□□□□ 0.53
ATP2A1O14983 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.37■□□□□ 0.53
ATP2A1O14983 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.37■□□□□ 0.53
ATP2A1O14983 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
ATP2A1O14983 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
ATP2A1O14983 LINC01115-203ENST00000606068 577 ntBASIC18.37■□□□□ 0.53
ATP2A1O14983 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A1O14983 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.37■□□□□ 0.53
ATP2A1O14983 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A1O14983 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A1O14983 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ATP2A1O14983 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP2A1O14983 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A1O14983 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
ATP2A1O14983 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A1O14983 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A1O14983 BNIP3P1-202ENST00000550043 1585 ntBASIC18.37■□□□□ 0.53
ATP2A1O14983 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A1O14983 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A1O14983 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ATP2A1O14983 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2A1O14983 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A1O14983 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ATP2A1O14983 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A1O14983 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A1O14983 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2A1O14983 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A1O14983 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A1O14983 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ATP2A1O14983 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A1O14983 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A1O14983 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A1O14983 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A1O14983 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A1O14983 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A1O14983 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A1O14983 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A1O14983 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A1O14983 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
ATP2A1O14983 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2A1O14983 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.36■□□□□ 0.53
ATP2A1O14983 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ATP2A1O14983 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2A1O14983 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ATP2A1O14983 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2A1O14983 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ATP2A1O14983 WFDC1-204ENST00000613603 549 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms