Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.47■□□□□ 0.07
PDLIM1O00151 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PDLIM1O00151 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PDLIM1O00151 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM1O00151 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.47■□□□□ 0.07
PDLIM1O00151 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.47■□□□□ 0.07
PDLIM1O00151 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.47■□□□□ 0.07
PDLIM1O00151 AC073592.4-201ENST00000623827 446 ntBASIC15.47■□□□□ 0.07
PDLIM1O00151 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM1O00151 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM1O00151 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PDLIM1O00151 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PDLIM1O00151 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PDLIM1O00151 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM1O00151 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDLIM1O00151 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.47■□□□□ 0.07
PDLIM1O00151 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.47■□□□□ 0.07
PDLIM1O00151 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.47■□□□□ 0.07
PDLIM1O00151 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PDLIM1O00151 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.47■□□□□ 0.07
PDLIM1O00151 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PDLIM1O00151 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.47■□□□□ 0.07
PDLIM1O00151 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM1O00151 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM1O00151 AC006486.2-201ENST00000624246 2199 ntBASIC15.46■□□□□ 0.07
PDLIM1O00151 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM1O00151 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM1O00151 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM1O00151 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM1O00151 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM1O00151 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM1O00151 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
PDLIM1O00151 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM1O00151 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.46■□□□□ 0.07
PDLIM1O00151 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PDLIM1O00151 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM1O00151 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM1O00151 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.46■□□□□ 0.07
PDLIM1O00151 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM1O00151 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.46■□□□□ 0.07
PDLIM1O00151 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM1O00151 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
PDLIM1O00151 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PDLIM1O00151 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM1O00151 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
PDLIM1O00151 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PDLIM1O00151 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.46■□□□□ 0.07
PDLIM1O00151 AL160237.2-201ENST00000556165 472 ntBASIC15.46■□□□□ 0.07
PDLIM1O00151 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
PDLIM1O00151 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM1O00151 MTDHP3-201ENST00000594186 672 ntBASIC15.46■□□□□ 0.07
PDLIM1O00151 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PDLIM1O00151 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PDLIM1O00151 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.46■□□□□ 0.07
PDLIM1O00151 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM1O00151 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
PDLIM1O00151 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM1O00151 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.46■□□□□ 0.07
PDLIM1O00151 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.46■□□□□ 0.07
PDLIM1O00151 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.46■□□□□ 0.07
PDLIM1O00151 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDLIM1O00151 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.46■□□□□ 0.07
PDLIM1O00151 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
PDLIM1O00151 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
PDLIM1O00151 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
PDLIM1O00151 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PDLIM1O00151 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PDLIM1O00151 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PDLIM1O00151 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.46■□□□□ 0.06
PDLIM1O00151 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
PDLIM1O00151 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.45■□□□□ 0.06
PDLIM1O00151 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
PDLIM1O00151 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PDLIM1O00151 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PDLIM1O00151 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.45■□□□□ 0.06
PDLIM1O00151 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PDLIM1O00151 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC15.45■□□□□ 0.06
PDLIM1O00151 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.45■□□□□ 0.06
PDLIM1O00151 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.45■□□□□ 0.06
PDLIM1O00151 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.45■□□□□ 0.06
PDLIM1O00151 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.45■□□□□ 0.06
PDLIM1O00151 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms