Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 MRPS18AP1-201ENST00000414458 589 ntBASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 TSSK5P-201ENST00000423978 907 ntBASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 SERBP1P5-201ENST00000510079 1181 ntBASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
NPIPA3F8WFD2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
NPIPA3F8WFD2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.71□□□□□ -0.06
NPIPA3F8WFD2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.71□□□□□ -0.06
NPIPA3F8WFD2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NPIPA3F8WFD2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.71□□□□□ -0.06
NPIPA3F8WFD2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
NPIPA3F8WFD2 AC067930.6-201ENST00000623257 4947 ntBASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 AC007326.2-201ENST00000624224 7579 ntBASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NPIPA3F8WFD2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms