Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 AC012569.1-201ENST00000591191 1524 ntBASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 AC138035.3-201ENST00000622706 2791 ntBASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 AL109954.1-202ENST00000564051 2148 ntBASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV5A0A0B4J249 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 DUSP5P1-201ENST00000441325 1139 ntBASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TRAV5A0A0B4J249 TMBIM7P-203ENST00000641617 1718 ntBASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 SCARNA2-201ENST00000458748 420 ntBASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 AC021087.4-201ENST00000563761 564 ntBASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 AC006557.2-201ENST00000592985 1240 ntBASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV5A0A0B4J249 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms