Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 DGCR5-201ENST00000399539 862 ntBASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 AC011495.1-201ENST00000498085 584 ntBASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 AC099568.2-201ENST00000609194 695 ntBASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 AC004461.2-201ENST00000629517 803 ntBASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CSNK1G3Q9Y6M4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 AC079328.2-201ENST00000561241 3354 ntBASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 GGT3P-204ENST00000453783 1664 ntBASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSNK1G3Q9Y6M4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 MEIS3P1-201ENST00000495167 958 ntBASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.77■□□□□ 0.12
CSNK1G3Q9Y6M4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms