Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 PRYP6-201ENST00000514804 343 ntBASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 AC040169.1-201ENST00000565382 521 ntBASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 RARRES2P8-201ENST00000566335 367 ntBASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 PKD1P5-201ENST00000532415 10291 ntBASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 AKAP8P1-201ENST00000434743 1349 ntBASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 KRT18P58-201ENST00000527480 1120 ntBASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGA11Q9Y5H2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGA11Q9Y5H2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGA11Q9Y5H2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.71■□□□□ 0.1
PCDHGA11Q9Y5H2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGA11Q9Y5H2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGA11Q9Y5H2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGA11Q9Y5H2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 AL589702.1-201ENST00000641229 1509 ntBASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 AC245100.5-201ENST00000452108 331 ntBASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 FAM86C2P-203ENST00000528684 1004 ntBASIC15.7■□□□□ 0.1
PCDHGA11Q9Y5H2 AC002347.1-201ENST00000569543 541 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms