Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 KRT223P-202ENST00000449164 1292 ntBASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 MIR4259-201ENST00000584466 101 ntBASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 MIR6775-201ENST00000617557 69 ntBASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 AL158212.4-201ENST00000624062 1286 ntBASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 COX11-210ENST00000639671 696 ntBASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHB7Q9Y5E2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.27■□□□□ 0.35
PCDHB7Q9Y5E2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB7Q9Y5E2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB7Q9Y5E2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB7Q9Y5E2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB7Q9Y5E2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB7Q9Y5E2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB7Q9Y5E2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB7Q9Y5E2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHB7Q9Y5E2 AC009053.2-201ENST00000563701 2365 ntBASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 AL442647.2-201ENST00000429864 857 ntBASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 TARDBPP1-201ENST00000442013 1203 ntBASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 AL391069.4-201ENST00000609583 481 ntBASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 BNIP3P1-202ENST00000550043 1585 ntBASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB7Q9Y5E2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 AL162726.2-201ENST00000438986 1017 ntBASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 CROCCP4-201ENST00000457096 498 ntBASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 CU634019.7-201ENST00000624153 1185 ntBASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 FP236241.2-201ENST00000624906 1185 ntBASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB7Q9Y5E2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms