Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
R3HCC1Q9Y3T6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 AL590627.1-203ENST00000421194 1026 ntBASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 AL356488.2-201ENST00000602755 427 ntBASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 AL353135.1-201ENST00000606729 504 ntBASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 C8orf49-201ENST00000525043 1968 ntBASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
R3HCC1Q9Y3T6 AC005089.1-201ENST00000619486 2241 ntBASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 AC116407.3-201ENST00000623905 1129 ntBASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.59■□□□□ 0.57
R3HCC1Q9Y3T6 GPR89P-201ENST00000407924 1495 ntBASIC18.58■□□□□ 0.57
R3HCC1Q9Y3T6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
R3HCC1Q9Y3T6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
R3HCC1Q9Y3T6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.58■□□□□ 0.57
R3HCC1Q9Y3T6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
R3HCC1Q9Y3T6 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.58■□□□□ 0.57
R3HCC1Q9Y3T6 AC007686.3-201ENST00000619017 3487 ntBASIC18.58■□□□□ 0.57
R3HCC1Q9Y3T6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
R3HCC1Q9Y3T6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
R3HCC1Q9Y3T6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
R3HCC1Q9Y3T6 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
R3HCC1Q9Y3T6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.58■□□□□ 0.57
R3HCC1Q9Y3T6 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
R3HCC1Q9Y3T6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms