Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 HSFY1P1-201ENST00000423928 1178 ntBASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 PGAM5P1-201ENST00000518923 814 ntBASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 AC026120.1-201ENST00000611536 926 ntBASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 LINC02199-201ENST00000506655 2702 ntBASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS9D1Q9Y2B5 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 AC011477.6-201ENST00000604980 1927 ntBASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 AC007950.2-201ENST00000615045 2347 ntBASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 ADH5P3-201ENST00000433842 1137 ntBASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 DNAJB3-201ENST00000446806 729 ntBASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 IGHV3-62-201ENST00000520057 340 ntBASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 AL391262.2-201ENST00000622466 494 ntBASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS9D1Q9Y2B5 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS9D1Q9Y2B5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VPS9D1Q9Y2B5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS9D1Q9Y2B5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS9D1Q9Y2B5 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS9D1Q9Y2B5 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS9D1Q9Y2B5 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS9D1Q9Y2B5 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
VPS9D1Q9Y2B5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
VPS9D1Q9Y2B5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS9D1Q9Y2B5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.1■□□□□ 0.17
VPS9D1Q9Y2B5 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms