Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 SPTLC1P1-201ENST00000447199 261 ntBASIC15.87■□□□□ 0.13
SATB2Q9UPW6 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.87■□□□□ 0.13
SATB2Q9UPW6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 KRT18P34-201ENST00000488218 1270 ntBASIC15.87■□□□□ 0.13
SATB2Q9UPW6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 AC021097.1-201ENST00000607902 574 ntBASIC15.87■□□□□ 0.13
SATB2Q9UPW6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.87■□□□□ 0.13
SATB2Q9UPW6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 PCDHA1-201ENST00000378133 2726 ntBASIC15.87■□□□□ 0.13
SATB2Q9UPW6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SATB2Q9UPW6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 CYP2A7P1-201ENST00000595391 815 ntBASIC15.86■□□□□ 0.13
SATB2Q9UPW6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SATB2Q9UPW6 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SATB2Q9UPW6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms