Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP25Q9UHP3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP25Q9UHP3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP25Q9UHP3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP25Q9UHP3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP25Q9UHP3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP25Q9UHP3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP25Q9UHP3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP25Q9UHP3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP25Q9UHP3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP25Q9UHP3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP25Q9UHP3 VN2R19P-201ENST00000442399 1052 ntBASIC18.57■□□□□ 0.56
USP25Q9UHP3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 AP002469.2-201ENST00000531724 424 ntBASIC18.57■□□□□ 0.56
USP25Q9UHP3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 AL160237.2-201ENST00000556165 472 ntBASIC18.57■□□□□ 0.56
USP25Q9UHP3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 AC104692.2-201ENST00000603054 253 ntBASIC18.57■□□□□ 0.56
USP25Q9UHP3 AL031055.1-201ENST00000606362 631 ntBASIC18.57■□□□□ 0.56
USP25Q9UHP3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 AL031008.1-201ENST00000619963 541 ntBASIC18.57■□□□□ 0.56
USP25Q9UHP3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP25Q9UHP3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
USP25Q9UHP3 AC006486.2-201ENST00000624246 2199 ntBASIC18.57■□□□□ 0.56
USP25Q9UHP3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP25Q9UHP3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP25Q9UHP3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP25Q9UHP3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP25Q9UHP3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP25Q9UHP3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP25Q9UHP3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP25Q9UHP3 AL450487.1-201ENST00000426799 995 ntBASIC18.56■□□□□ 0.56
USP25Q9UHP3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP25Q9UHP3 AL513480.1-201ENST00000451731 511 ntBASIC18.56■□□□□ 0.56
USP25Q9UHP3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 MIR4751-201ENST00000578027 74 ntBASIC18.56■□□□□ 0.56
USP25Q9UHP3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 MIR7706-201ENST00000613747 67 ntBASIC18.56■□□□□ 0.56
USP25Q9UHP3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USP25Q9UHP3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.56■□□□□ 0.56
USP25Q9UHP3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USP25Q9UHP3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP25Q9UHP3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP25Q9UHP3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP25Q9UHP3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP25Q9UHP3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.55■□□□□ 0.56
USP25Q9UHP3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.55■□□□□ 0.56
USP25Q9UHP3 AL592424.1-201ENST00000563624 1536 ntBASIC18.55■□□□□ 0.56
USP25Q9UHP3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.55■□□□□ 0.56
USP25Q9UHP3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP25Q9UHP3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
USP25Q9UHP3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP25Q9UHP3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP25Q9UHP3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.55■□□□□ 0.56
USP25Q9UHP3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP25Q9UHP3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.55■□□□□ 0.56
USP25Q9UHP3 MIR648-201ENST00000385046 94 ntBASIC18.55■□□□□ 0.56
USP25Q9UHP3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
USP25Q9UHP3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.55■□□□□ 0.56
USP25Q9UHP3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
USP25Q9UHP3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP25Q9UHP3 AC093909.1-201ENST00000504731 1122 ntBASIC18.55■□□□□ 0.56
USP25Q9UHP3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.55■□□□□ 0.56
USP25Q9UHP3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP25Q9UHP3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.55■□□□□ 0.56
USP25Q9UHP3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms