Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
GTF2IRD1Q9UHL9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2IRD1Q9UHL9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2IRD1Q9UHL9 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2IRD1Q9UHL9 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.62■□□□□ 0.41
GTF2IRD1Q9UHL9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2IRD1Q9UHL9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
GTF2IRD1Q9UHL9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GTF2IRD1Q9UHL9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 REXO1L8P-201ENST00000604378 1897 ntBASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 TOMM22P5-201ENST00000416399 439 ntBASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 SLC25A47P1-201ENST00000531577 414 ntBASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 AL359711.2-201ENST00000563105 872 ntBASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 OR6D1P-202ENST00000641007 5290 ntBASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.61■□□□□ 0.41
GTF2IRD1Q9UHL9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 ACTG1P3-201ENST00000431775 1114 ntBASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.6■□□□□ 0.41
GTF2IRD1Q9UHL9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 FLJ38576-201ENST00000623820 2459 ntBASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 BNIP3P42-201ENST00000454982 569 ntBASIC17.59■□□□□ 0.41
GTF2IRD1Q9UHL9 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms