Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIP2Q9UDT6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIP2Q9UDT6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIP2Q9UDT6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIP2Q9UDT6 GGT3P-204ENST00000453783 1664 ntBASIC19.17■□□□□ 0.66
CLIP2Q9UDT6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.17■□□□□ 0.66
CLIP2Q9UDT6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIP2Q9UDT6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 UGT1A2P-201ENST00000454886 866 ntBASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 AL512638.1-201ENST00000457493 794 ntBASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 AC073592.8-201ENST00000624126 511 ntBASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 AC005622.1-201ENST00000636801 1703 ntBASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIP2Q9UDT6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 MTND6P24-201ENST00000440466 518 ntBASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 RN7SL828P-201ENST00000607615 303 ntBASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 AL138828.2-201ENST00000615812 383 ntBASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 SPDYE12P-201ENST00000618416 771 ntBASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.15■□□□□ 0.66
CLIP2Q9UDT6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CLIP2Q9UDT6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CLIP2Q9UDT6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CLIP2Q9UDT6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
CLIP2Q9UDT6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLIP2Q9UDT6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 BANF1P1-201ENST00000553684 263 ntBASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 AC105021.1-202ENST00000570572 669 ntBASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 AL590560.3-201ENST00000623350 461 ntBASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 AL035456.1-201ENST00000456064 1369 ntBASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 AC105917.1-201ENST00000506637 2539 ntBASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 LINC01144-201ENST00000626198 1710 ntBASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CLIP2Q9UDT6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms