Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 AL691432.1-201ENST00000596308 1422 ntBASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 HIST3H2BA-201ENST00000436555 524 ntBASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 SPTLC1P1-201ENST00000447199 261 ntBASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 RN7SL618P-201ENST00000477850 296 ntBASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 AC044860.1-202ENST00000559481 777 ntBASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMG20BQ9P0W2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HMG20BQ9P0W2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMG20BQ9P0W2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMG20BQ9P0W2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HMG20BQ9P0W2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
HMG20BQ9P0W2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMG20BQ9P0W2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
HMG20BQ9P0W2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMG20BQ9P0W2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMG20BQ9P0W2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.58■□□□□ 0.73
HMG20BQ9P0W2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HMG20BQ9P0W2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.58■□□□□ 0.73
HMG20BQ9P0W2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMG20BQ9P0W2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMG20BQ9P0W2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.58■□□□□ 0.72
HMG20BQ9P0W2 AC009118.2-201ENST00000613275 655 ntBASIC19.58■□□□□ 0.72
HMG20BQ9P0W2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMG20BQ9P0W2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
HMG20BQ9P0W2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
HMG20BQ9P0W2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMG20BQ9P0W2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMG20BQ9P0W2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMG20BQ9P0W2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
HMG20BQ9P0W2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
HMG20BQ9P0W2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.58■□□□□ 0.72
HMG20BQ9P0W2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMG20BQ9P0W2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.58■□□□□ 0.72
HMG20BQ9P0W2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMG20BQ9P0W2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMG20BQ9P0W2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMG20BQ9P0W2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 AC245100.5-201ENST00000452108 331 ntBASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 AC004790.1-201ENST00000612686 536 ntBASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMG20BQ9P0W2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HMG20BQ9P0W2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms