Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 AC087499.1-201ENST00000418141 1075 ntBASIC15.71■□□□□ 0.11
NDE1Q9NXR1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 PAWRP1-201ENST00000451083 565 ntBASIC15.71■□□□□ 0.11
NDE1Q9NXR1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 AC091607.1-201ENST00000490318 1060 ntBASIC15.71■□□□□ 0.11
NDE1Q9NXR1 AC096582.2-201ENST00000510860 516 ntBASIC15.71■□□□□ 0.11
NDE1Q9NXR1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 Z69720.1-201ENST00000601483 472 ntBASIC15.71■□□□□ 0.11
NDE1Q9NXR1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDE1Q9NXR1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
NDE1Q9NXR1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NDE1Q9NXR1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.71■□□□□ 0.1
NDE1Q9NXR1 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
NDE1Q9NXR1 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
NDE1Q9NXR1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NDE1Q9NXR1 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NDE1Q9NXR1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
NDE1Q9NXR1 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NDE1Q9NXR1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NDE1Q9NXR1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
NDE1Q9NXR1 AC008677.1-201ENST00000519230 1561 ntBASIC15.7■□□□□ 0.1
NDE1Q9NXR1 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 AK4P3-201ENST00000418260 669 ntBASIC15.7■□□□□ 0.1
NDE1Q9NXR1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 PRYP5-201ENST00000451909 266 ntBASIC15.7■□□□□ 0.1
NDE1Q9NXR1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 REXO1L3P-201ENST00000622202 1288 ntBASIC15.7■□□□□ 0.1
NDE1Q9NXR1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 AL353732.1-201ENST00000569618 1459 ntBASIC15.7■□□□□ 0.1
NDE1Q9NXR1 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDE1Q9NXR1 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 AC005622.1-201ENST00000636801 1703 ntBASIC15.69■□□□□ 0.1
NDE1Q9NXR1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.69■□□□□ 0.1
NDE1Q9NXR1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDE1Q9NXR1 AC087641.1-201ENST00000557561 1021 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms