Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HCFC1R1Q9NWW0 AC134407.2-201ENST00000625089 1978 ntBASIC16.64■□□□□ 0.25
HCFC1R1Q9NWW0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.64■□□□□ 0.25
HCFC1R1Q9NWW0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.64■□□□□ 0.25
HCFC1R1Q9NWW0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HCFC1R1Q9NWW0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 AL442647.2-201ENST00000429864 857 ntBASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 MIR5189-201ENST00000577370 114 ntBASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HCFC1R1Q9NWW0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 BRI3BPP1-201ENST00000594224 787 ntBASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 AC233724.13-201ENST00000598383 410 ntBASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HCFC1R1Q9NWW0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 AC079328.2-201ENST00000561241 3354 ntBASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 AL162726.2-201ENST00000438986 1017 ntBASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 TDH-203ENST00000531764 1110 ntBASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.61■□□□□ 0.25
HCFC1R1Q9NWW0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms