Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 AC009477.1-201ENST00000452936 217 ntBASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 AC140912.1-201ENST00000577171 1054 ntBASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 TOP3BP1-201ENST00000420768 1380 ntBASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF3Q9NR81 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 HILS1-202ENST00000545329 423 ntBASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 AC007541.1-201ENST00000570282 1469 ntBASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF3Q9NR81 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 AC098614.1-201ENST00000368528 745 ntBASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ARHGEF3Q9NR81 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms