Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 AL031432.5-201ENST00000641059 760 ntBASIC19.24■□□□□ 0.67
RTN4Q9NQC3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 REXO1L2P-201ENST00000425429 2069 ntBASIC19.24■□□□□ 0.67
RTN4Q9NQC3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 AJ011931.1-201ENST00000618749 2492 ntBASIC19.24■□□□□ 0.67
RTN4Q9NQC3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RTN4Q9NQC3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 PCDHA3-202ENST00000532566 4594 ntBASIC19.23■□□□□ 0.67
RTN4Q9NQC3 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 AL353692.3-201ENST00000407031 1396 ntBASIC19.23■□□□□ 0.67
RTN4Q9NQC3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 UBA52-202ENST00000442744 2845 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.23■□□□□ 0.67
RTN4Q9NQC3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 COX11P1-201ENST00000489116 835 ntBASIC19.23■□□□□ 0.67
RTN4Q9NQC3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 AC010203.1-204ENST00000548782 407 ntBASIC19.23■□□□□ 0.67
RTN4Q9NQC3 AC079791.1-201ENST00000605356 973 ntBASIC19.23■□□□□ 0.67
RTN4Q9NQC3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RTN4Q9NQC3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 MIR662-201ENST00000384847 95 ntBASIC19.22■□□□□ 0.67
RTN4Q9NQC3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 AC135178.5-201ENST00000602597 674 ntBASIC19.22■□□□□ 0.67
RTN4Q9NQC3 AC011558.1-201ENST00000623459 338 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms