Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 ELK2BP-201ENST00000415014 1224 ntBASIC19.9■□□□□ 0.78
UPF2Q9HAU5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 AC006557.2-201ENST00000592985 1240 ntBASIC19.9■□□□□ 0.78
UPF2Q9HAU5 AC092119.3-201ENST00000612618 583 ntBASIC19.9■□□□□ 0.78
UPF2Q9HAU5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
UPF2Q9HAU5 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
UPF2Q9HAU5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
UPF2Q9HAU5 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
UPF2Q9HAU5 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.78
UPF2Q9HAU5 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 AC006504.4-201ENST00000592118 1568 ntBASIC19.89■□□□□ 0.77
UPF2Q9HAU5 AC087481.3-201ENST00000602886 1894 ntBASIC19.89■□□□□ 0.77
UPF2Q9HAU5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 AP000550.4-202ENST00000639755 178 ntBASIC19.89■□□□□ 0.77
UPF2Q9HAU5 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
UPF2Q9HAU5 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.88■□□□□ 0.77
UPF2Q9HAU5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 AL109954.1-202ENST00000564051 2148 ntBASIC19.88■□□□□ 0.77
UPF2Q9HAU5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPF2Q9HAU5 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC19.87■□□□□ 0.77
UPF2Q9HAU5 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms