Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC026954.1-201ENST00000429771 1293 ntBASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 YBX1P6-201ENST00000442962 1002 ntBASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 PFN1P12-201ENST00000455938 534 ntBASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 ZNF767P-206ENST00000513792 565 ntBASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 EMC4-209ENST00000559421 497 ntTSL 2 BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 AC134312.5-201ENST00000568031 1313 ntBASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 AL139099.5-201ENST00000635274 300 ntBASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 AC092171.3-201ENST00000610122 2651 ntBASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RTFDC1Q9BY42 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 AGER-206ENST00000375070 1463 ntTSL 5 BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 AC099548.2-209ENST00000480264 625 ntBASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 AC106760.1-201ENST00000508690 800 ntBASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 KRT90P-201ENST00000549264 1064 ntBASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 GNRHR2-203ENST00000581100 1187 ntBASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 AC244669.2-201ENST00000612320 853 ntBASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 AC008687.7-202ENST00000637404 953 ntBASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.37■□□□□ 0.69
RTFDC1Q9BY42 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 BCL2-203ENST00000589955 5011 ntBASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 MIR1247-201ENST00000408206 136 ntBASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 GPAA1P2-201ENST00000417923 928 ntBASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 PHKG1P2-201ENST00000457537 863 ntBASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 MIR3615-201ENST00000581999 87 ntBASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 RHOXF1P1-202ENST00000635473 501 ntBASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 AC068587.10-201ENST00000641210 219 ntBASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.36■□□□□ 0.69
RTFDC1Q9BY42 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms