Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 AC112504.1-201ENST00000623415 1841 ntBASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 AC087163.2-201ENST00000457299 853 ntBASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 SLC25A6P2-201ENST00000497974 877 ntBASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 AC055717.3-201ENST00000622967 595 ntBASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 AC004877.2-201ENST00000623941 599 ntBASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 BCAR1-209ENST00000546196 1340 ntBASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 AC068587.6-202ENST00000641839 5619 ntBASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBA1CQ9BQE3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 MCCD1P2-201ENST00000423228 335 ntBASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 CXCL1P1-201ENST00000502804 216 ntBASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA1CQ9BQE3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 RHOQP3-201ENST00000437982 621 ntBASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 KRT19P2-202ENST00000557173 1012 ntBASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TUBA1CQ9BQE3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms