Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.51■□□□□ 0.55
ARID3AQ99856 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
ARID3AQ99856 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ARID3AQ99856 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ARID3AQ99856 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ARID3AQ99856 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.51■□□□□ 0.55
ARID3AQ99856 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ARID3AQ99856 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ARID3AQ99856 EGFEM1P-202ENST00000431685 1563 ntBASIC18.51■□□□□ 0.55
ARID3AQ99856 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.51■□□□□ 0.55
ARID3AQ99856 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ARID3AQ99856 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ARID3AQ99856 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ARID3AQ99856 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.5■□□□□ 0.55
ARID3AQ99856 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.5■□□□□ 0.55
ARID3AQ99856 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ARID3AQ99856 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.5■□□□□ 0.55
ARID3AQ99856 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.5■□□□□ 0.55
ARID3AQ99856 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.5■□□□□ 0.55
ARID3AQ99856 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
ARID3AQ99856 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.5■□□□□ 0.55
ARID3AQ99856 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.5■□□□□ 0.55
ARID3AQ99856 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ARID3AQ99856 AC148477.8-201ENST00000624298 468 ntBASIC18.5■□□□□ 0.55
ARID3AQ99856 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ARID3AQ99856 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ARID3AQ99856 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ARID3AQ99856 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ARID3AQ99856 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC18.5■□□□□ 0.55
ARID3AQ99856 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARID3AQ99856 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC18.5■□□□□ 0.55
ARID3AQ99856 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ARID3AQ99856 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC18.5■□□□□ 0.55
ARID3AQ99856 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.5■□□□□ 0.55
ARID3AQ99856 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC18.49■□□□□ 0.55
ARID3AQ99856 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ARID3AQ99856 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ARID3AQ99856 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARID3AQ99856 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARID3AQ99856 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARID3AQ99856 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC18.49■□□□□ 0.55
ARID3AQ99856 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.49■□□□□ 0.55
ARID3AQ99856 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC18.49■□□□□ 0.55
ARID3AQ99856 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ARID3AQ99856 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ARID3AQ99856 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARID3AQ99856 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
ARID3AQ99856 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ARID3AQ99856 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARID3AQ99856 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARID3AQ99856 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ARID3AQ99856 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ARID3AQ99856 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARID3AQ99856 ACTG1P4-201ENST00000425123 1122 ntBASIC18.49■□□□□ 0.55
ARID3AQ99856 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ARID3AQ99856 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.49■□□□□ 0.55
ARID3AQ99856 SCARNA2-201ENST00000458748 420 ntBASIC18.49■□□□□ 0.55
ARID3AQ99856 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.49■□□□□ 0.55
ARID3AQ99856 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.49■□□□□ 0.55
ARID3AQ99856 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.49■□□□□ 0.55
ARID3AQ99856 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.49■□□□□ 0.55
ARID3AQ99856 AC104692.2-201ENST00000603054 253 ntBASIC18.49■□□□□ 0.55
ARID3AQ99856 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.49■□□□□ 0.55
ARID3AQ99856 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.49■□□□□ 0.55
ARID3AQ99856 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
ARID3AQ99856 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARID3AQ99856 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARID3AQ99856 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
ARID3AQ99856 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARID3AQ99856 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARID3AQ99856 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
ARID3AQ99856 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ARID3AQ99856 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARID3AQ99856 PRAL-201ENST00000624952 3286 ntBASIC18.48■□□□□ 0.55
ARID3AQ99856 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARID3AQ99856 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms