Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 ACKR1-201ENST00000368121 1240 ntBASIC16.16■□□□□ 0.18
SHDQ96IW2 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.16■□□□□ 0.18
SHDQ96IW2 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.16■□□□□ 0.18
SHDQ96IW2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.16■□□□□ 0.18
SHDQ96IW2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHDQ96IW2 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SHDQ96IW2 VDAC1P7-201ENST00000462417 847 ntBASIC16.16■□□□□ 0.18
SHDQ96IW2 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.16■□□□□ 0.18
SHDQ96IW2 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.16■□□□□ 0.18
SHDQ96IW2 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHDQ96IW2 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.16■□□□□ 0.18
SHDQ96IW2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.16■□□□□ 0.18
SHDQ96IW2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
SHDQ96IW2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.16■□□□□ 0.18
SHDQ96IW2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SHDQ96IW2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SHDQ96IW2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHDQ96IW2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHDQ96IW2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.16■□□□□ 0.18
SHDQ96IW2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHDQ96IW2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SHDQ96IW2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SHDQ96IW2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHDQ96IW2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHDQ96IW2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHDQ96IW2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.15■□□□□ 0.18
SHDQ96IW2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.15■□□□□ 0.18
SHDQ96IW2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHDQ96IW2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHDQ96IW2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.15■□□□□ 0.18
SHDQ96IW2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SHDQ96IW2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SHDQ96IW2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SHDQ96IW2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHDQ96IW2 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHDQ96IW2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHDQ96IW2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SHDQ96IW2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHDQ96IW2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHDQ96IW2 CALR4P-201ENST00000431943 946 ntBASIC16.15■□□□□ 0.18
SHDQ96IW2 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.15■□□□□ 0.18
SHDQ96IW2 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.15■□□□□ 0.18
SHDQ96IW2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.15■□□□□ 0.18
SHDQ96IW2 SLED1-202ENST00000512051 380 ntBASIC16.15■□□□□ 0.18
SHDQ96IW2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SHDQ96IW2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHDQ96IW2 RHOQP1-201ENST00000555758 579 ntBASIC16.15■□□□□ 0.18
SHDQ96IW2 C2orf69P2-201ENST00000562032 1123 ntBASIC16.15■□□□□ 0.18
SHDQ96IW2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
SHDQ96IW2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHDQ96IW2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.15■□□□□ 0.18
SHDQ96IW2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.15■□□□□ 0.18
SHDQ96IW2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.15■□□□□ 0.18
SHDQ96IW2 AC244452.3-201ENST00000636814 210 ntBASIC16.15■□□□□ 0.18
SHDQ96IW2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.15■□□□□ 0.18
SHDQ96IW2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHDQ96IW2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHDQ96IW2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHDQ96IW2 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHDQ96IW2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
SHDQ96IW2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHDQ96IW2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SHDQ96IW2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
SHDQ96IW2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SHDQ96IW2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.14■□□□□ 0.18
SHDQ96IW2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SHDQ96IW2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.14■□□□□ 0.17
SHDQ96IW2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.14■□□□□ 0.17
SHDQ96IW2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SHDQ96IW2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.14■□□□□ 0.17
SHDQ96IW2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHDQ96IW2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHDQ96IW2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHDQ96IW2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHDQ96IW2 AC074338.1-201ENST00000416825 156 ntBASIC16.14■□□□□ 0.17
SHDQ96IW2 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.14■□□□□ 0.17
SHDQ96IW2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SHDQ96IW2 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.14■□□□□ 0.17
SHDQ96IW2 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHDQ96IW2 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.14■□□□□ 0.17
SHDQ96IW2 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.14■□□□□ 0.17
SHDQ96IW2 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHDQ96IW2 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHDQ96IW2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.14■□□□□ 0.17
SHDQ96IW2 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.14■□□□□ 0.17
SHDQ96IW2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.14■□□□□ 0.17
SHDQ96IW2 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.14■□□□□ 0.17
SHDQ96IW2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.14■□□□□ 0.17
SHDQ96IW2 AC244669.2-201ENST00000612320 853 ntBASIC16.14■□□□□ 0.17
SHDQ96IW2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHDQ96IW2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.14■□□□□ 0.17
SHDQ96IW2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.14■□□□□ 0.17
SHDQ96IW2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.14■□□□□ 0.17
SHDQ96IW2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHDQ96IW2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHDQ96IW2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHDQ96IW2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.14■□□□□ 0.17
SHDQ96IW2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SHDQ96IW2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SHDQ96IW2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms