Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AL136982.4-201ENST00000437689 1740 ntBASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 RARRES2P9-201ENST00000565168 469 ntBASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 AC026979.3-201ENST00000607315 403 ntBASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM5Q96HC4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 REXO1L1P-202ENST00000608646 1974 ntBASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 AC020658.6-201ENST00000623564 1870 ntBASIC15.74■□□□□ 0.11
PDLIM5Q96HC4 AC092850.2-201ENST00000623821 2697 ntBASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.73■□□□□ 0.11
PDLIM5Q96HC4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms