Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 AC040169.1-201ENST00000565382 521 ntBASIC17.1■□□□□ 0.33
TRIM11Q96F44 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM11Q96F44 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM11Q96F44 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM11Q96F44 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM11Q96F44 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM11Q96F44 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM11Q96F44 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM11Q96F44 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM11Q96F44 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.09■□□□□ 0.33
TRIM11Q96F44 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM11Q96F44 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM11Q96F44 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM11Q96F44 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM11Q96F44 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM11Q96F44 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM11Q96F44 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRIM11Q96F44 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM11Q96F44 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM11Q96F44 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM11Q96F44 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM11Q96F44 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM11Q96F44 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM11Q96F44 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TRIM11Q96F44 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM11Q96F44 FAM58CP-201ENST00000435741 640 ntBASIC17.09■□□□□ 0.33
TRIM11Q96F44 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRIM11Q96F44 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM11Q96F44 AC243562.2-201ENST00000561247 970 ntBASIC17.09■□□□□ 0.33
TRIM11Q96F44 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM11Q96F44 AL138918.1-201ENST00000568306 659 ntBASIC17.09■□□□□ 0.33
TRIM11Q96F44 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.09■□□□□ 0.33
TRIM11Q96F44 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM11Q96F44 AC027307.2-201ENST00000591252 911 ntBASIC17.09■□□□□ 0.33
TRIM11Q96F44 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRIM11Q96F44 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM11Q96F44 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM11Q96F44 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRIM11Q96F44 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM11Q96F44 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM11Q96F44 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
TRIM11Q96F44 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRIM11Q96F44 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM11Q96F44 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM11Q96F44 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM11Q96F44 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM11Q96F44 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM11Q96F44 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.08■□□□□ 0.33
TRIM11Q96F44 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TRIM11Q96F44 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TRIM11Q96F44 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM11Q96F44 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TRIM11Q96F44 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM11Q96F44 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM11Q96F44 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM11Q96F44 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM11Q96F44 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM11Q96F44 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM11Q96F44 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM11Q96F44 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM11Q96F44 AC026396.1-201ENST00000419388 421 ntBASIC17.08■□□□□ 0.32
TRIM11Q96F44 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.08■□□□□ 0.32
TRIM11Q96F44 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM11Q96F44 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.08■□□□□ 0.32
TRIM11Q96F44 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM11Q96F44 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM11Q96F44 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.08■□□□□ 0.32
TRIM11Q96F44 AC061975.2-201ENST00000581722 295 ntBASIC17.08■□□□□ 0.32
TRIM11Q96F44 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM11Q96F44 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM11Q96F44 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.08■□□□□ 0.32
TRIM11Q96F44 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM11Q96F44 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
TRIM11Q96F44 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM11Q96F44 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM11Q96F44 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM11Q96F44 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM11Q96F44 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM11Q96F44 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TRIM11Q96F44 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM11Q96F44 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM11Q96F44 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM11Q96F44 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
TRIM11Q96F44 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.08■□□□□ 0.32
TRIM11Q96F44 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRIM11Q96F44 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM11Q96F44 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM11Q96F44 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM11Q96F44 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM11Q96F44 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM11Q96F44 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms