Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
DDX1Q92499 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
DDX1Q92499 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
DDX1Q92499 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.16■□□□□ 0.34
DDX1Q92499 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DDX1Q92499 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
DDX1Q92499 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX1Q92499 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.16■□□□□ 0.34
DDX1Q92499 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX1Q92499 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.16■□□□□ 0.34
DDX1Q92499 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.16■□□□□ 0.34
DDX1Q92499 AP3S2-216ENST00000617003 1561 ntBASIC17.16■□□□□ 0.34
DDX1Q92499 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX1Q92499 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
DDX1Q92499 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
DDX1Q92499 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DDX1Q92499 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX1Q92499 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX1Q92499 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.16■□□□□ 0.34
DDX1Q92499 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.16■□□□□ 0.34
DDX1Q92499 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.16■□□□□ 0.34
DDX1Q92499 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
DDX1Q92499 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.16■□□□□ 0.34
DDX1Q92499 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.16■□□□□ 0.34
DDX1Q92499 IGHV3-62-201ENST00000520057 340 ntBASIC17.16■□□□□ 0.34
DDX1Q92499 AC109322.1-201ENST00000524499 1264 ntBASIC17.16■□□□□ 0.34
DDX1Q92499 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.16■□□□□ 0.34
DDX1Q92499 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.16■□□□□ 0.34
DDX1Q92499 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.16■□□□□ 0.34
DDX1Q92499 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.16■□□□□ 0.34
DDX1Q92499 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.16■□□□□ 0.34
DDX1Q92499 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.16■□□□□ 0.34
DDX1Q92499 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
DDX1Q92499 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX1Q92499 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.16■□□□□ 0.34
DDX1Q92499 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX1Q92499 PRAL-201ENST00000624952 3286 ntBASIC17.16■□□□□ 0.34
DDX1Q92499 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX1Q92499 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX1Q92499 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX1Q92499 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DDX1Q92499 AL136982.4-201ENST00000437689 1740 ntBASIC17.16■□□□□ 0.34
DDX1Q92499 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
DDX1Q92499 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
DDX1Q92499 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
DDX1Q92499 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.15■□□□□ 0.34
DDX1Q92499 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.15■□□□□ 0.34
DDX1Q92499 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.15■□□□□ 0.34
DDX1Q92499 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.15■□□□□ 0.34
DDX1Q92499 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
DDX1Q92499 HLA-H-201ENST00000383620 1096 ntBASIC17.15■□□□□ 0.34
DDX1Q92499 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
DDX1Q92499 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.15■□□□□ 0.34
DDX1Q92499 FAM58DP-201ENST00000428076 619 ntBASIC17.15■□□□□ 0.34
DDX1Q92499 FAM207CP-201ENST00000443486 507 ntBASIC17.15■□□□□ 0.34
DDX1Q92499 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.15■□□□□ 0.34
DDX1Q92499 RNA5SP410-201ENST00000516285 106 ntBASIC17.15■□□□□ 0.34
DDX1Q92499 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.15■□□□□ 0.34
DDX1Q92499 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.15■□□□□ 0.34
DDX1Q92499 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
DDX1Q92499 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
DDX1Q92499 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 BNIP3P1-202ENST00000550043 1585 ntBASIC17.15■□□□□ 0.34
DDX1Q92499 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
DDX1Q92499 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DDX1Q92499 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.15■□□□□ 0.34
DDX1Q92499 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
DDX1Q92499 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
DDX1Q92499 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
DDX1Q92499 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.14■□□□□ 0.33
DDX1Q92499 AL139384.1-201ENST00000612143 3047 ntBASIC17.14■□□□□ 0.33
DDX1Q92499 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
DDX1Q92499 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
DDX1Q92499 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX1Q92499 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX1Q92499 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms