Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AC093813.1-201ENST00000605066 256 ntBASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 DPY19L2P5-201ENST00000456300 331 ntBASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AC027237.1-201ENST00000560942 655 ntBASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 LINC01783-202ENST00000614408 828 ntBASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 BX284668.2-205ENST00000619677 828 ntBASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE2Q8WXH0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 AP000920.1-201ENST00000531824 344 ntBASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 AP000911.2-201ENST00000534330 502 ntBASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 AL672207.1-201ENST00000328462 1570 ntBASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 KRT18P25-201ENST00000508931 1278 ntBASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 AC005865.2-202ENST00000635814 725 ntBASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 AL021707.6-201ENST00000609212 491 ntBASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNE2Q8WXH0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms