Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 AC126365.1-201ENST00000578585 1514 ntBASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 KRT8P44-201ENST00000441609 1350 ntBASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 RCN1P2-201ENST00000398357 915 ntBASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 AL160237.2-201ENST00000556165 472 ntBASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 BNIP3P18-201ENST00000593976 575 ntBASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 AF228730.7-201ENST00000641842 219 ntBASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SMIM4Q8WVI0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SMIM4Q8WVI0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.83□□□□□ -0.19
SMIM4Q8WVI0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms