Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 HBZP1-201ENST00000354915 429 ntBASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 ABHD17AP1-201ENST00000358206 933 ntBASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 FITM1-202ENST00000559294 800 ntBASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 AC026471.5-201ENST00000615068 467 ntBASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 AC113410.3-201ENST00000623366 203 ntBASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.28■□□□□ 0.2
BCAS4Q8TDM0 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 AC243591.1-201ENST00000452967 1364 ntBASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 AL390955.1-201ENST00000428694 934 ntBASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 RBM17P1-201ENST00000453646 1190 ntBASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 MIR4492-201ENST00000581627 80 ntBASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
BCAS4Q8TDM0 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.27■□□□□ 0.19
BCAS4Q8TDM0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.26■□□□□ 0.19
BCAS4Q8TDM0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCAS4Q8TDM0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.26■□□□□ 0.19
BCAS4Q8TDM0 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCAS4Q8TDM0 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCAS4Q8TDM0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCAS4Q8TDM0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
BCAS4Q8TDM0 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCAS4Q8TDM0 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCAS4Q8TDM0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCAS4Q8TDM0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCAS4Q8TDM0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms