Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
NUP43Q8NFH3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 AC105917.1-201ENST00000506637 2539 ntBASIC15.13■□□□□ 0.01
NUP43Q8NFH3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 AP003680.1-201ENST00000598970 3660 ntBASIC15.13■□□□□ 0.01
NUP43Q8NFH3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NUP43Q8NFH3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 AC142381.1-201ENST00000426099 345 ntBASIC15.12■□□□□ 0.01
NUP43Q8NFH3 RNA5SP410-201ENST00000516285 106 ntBASIC15.12■□□□□ 0.01
NUP43Q8NFH3 AP000842.3-202ENST00000569238 1080 ntBASIC15.12■□□□□ 0.01
NUP43Q8NFH3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms