Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KLHDC9Q8NEP7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 AP001094.4-201ENST00000579008 2176 ntBASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 BCL2-203ENST00000589955 5011 ntBASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 UBALD1-205ENST00000590891 2641 ntBASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KLHDC9Q8NEP7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 DRD5P1-201ENST00000456605 1438 ntBASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 AC004945.1-201ENST00000416738 983 ntBASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 AC006033.1-201ENST00000440505 426 ntBASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 AC091271.1-201ENST00000611877 1162 ntBASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 AL607033.1-201ENST00000623900 1599 ntBASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.57■□□□□ 0.4
KLHDC9Q8NEP7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 KRT8P13-201ENST00000463294 1010 ntBASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 KRT18P43-201ENST00000469825 1281 ntBASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 FAM86HP-204ENST00000513466 959 ntBASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 AC093813.1-201ENST00000605066 256 ntBASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
KLHDC9Q8NEP7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms