Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 MIR661-201ENST00000384842 89 ntBASIC18.71■□□□□ 0.59
PNMA1Q8ND90 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 AC008738.7-201ENST00000609744 511 ntBASIC18.71■□□□□ 0.59
PNMA1Q8ND90 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.71■□□□□ 0.59
PNMA1Q8ND90 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.71■□□□□ 0.59
PNMA1Q8ND90 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
PNMA1Q8ND90 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 AZGP1P1-201ENST00000411909 902 ntBASIC18.7■□□□□ 0.58
PNMA1Q8ND90 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
PNMA1Q8ND90 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 AC044860.1-202ENST00000559481 777 ntBASIC18.69■□□□□ 0.58
PNMA1Q8ND90 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 AC079416.2-201ENST00000625035 1193 ntBASIC18.69■□□□□ 0.58
PNMA1Q8ND90 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PNMA1Q8ND90 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 REXO1L1P-202ENST00000608646 1974 ntBASIC18.68■□□□□ 0.58
PNMA1Q8ND90 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PNMA1Q8ND90 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms