Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SCML4Q8N228 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.71■□□□□ 0.27
SCML4Q8N228 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.71■□□□□ 0.27
SCML4Q8N228 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.71■□□□□ 0.27
SCML4Q8N228 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.71■□□□□ 0.27
SCML4Q8N228 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.71■□□□□ 0.27
SCML4Q8N228 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SCML4Q8N228 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.71■□□□□ 0.27
SCML4Q8N228 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.71■□□□□ 0.27
SCML4Q8N228 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 HNRNPUP1-201ENST00000554987 333 ntBASIC16.71■□□□□ 0.27
SCML4Q8N228 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.71■□□□□ 0.27
SCML4Q8N228 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.71■□□□□ 0.27
SCML4Q8N228 AC097359.3-201ENST00000603982 1210 ntBASIC16.71■□□□□ 0.27
SCML4Q8N228 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.71■□□□□ 0.27
SCML4Q8N228 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SCML4Q8N228 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
SCML4Q8N228 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SCML4Q8N228 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCML4Q8N228 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCML4Q8N228 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCML4Q8N228 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SCML4Q8N228 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCML4Q8N228 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCML4Q8N228 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.7■□□□□ 0.26
SCML4Q8N228 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCML4Q8N228 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCML4Q8N228 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCML4Q8N228 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCML4Q8N228 AC024909.3-201ENST00000611513 2257 ntBASIC16.7■□□□□ 0.26
SCML4Q8N228 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCML4Q8N228 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.7■□□□□ 0.26
SCML4Q8N228 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.7■□□□□ 0.26
SCML4Q8N228 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SCML4Q8N228 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.7■□□□□ 0.26
SCML4Q8N228 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.7■□□□□ 0.26
SCML4Q8N228 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCML4Q8N228 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SCML4Q8N228 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCML4Q8N228 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCML4Q8N228 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCML4Q8N228 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.7■□□□□ 0.26
SCML4Q8N228 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SCML4Q8N228 AC074044.1-201ENST00000609673 707 ntBASIC16.7■□□□□ 0.26
SCML4Q8N228 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.7■□□□□ 0.26
SCML4Q8N228 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.7■□□□□ 0.26
SCML4Q8N228 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCML4Q8N228 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCML4Q8N228 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCML4Q8N228 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.7■□□□□ 0.26
SCML4Q8N228 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.7■□□□□ 0.26
SCML4Q8N228 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCML4Q8N228 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.7■□□□□ 0.26
SCML4Q8N228 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
SCML4Q8N228 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCML4Q8N228 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCML4Q8N228 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCML4Q8N228 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCML4Q8N228 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.69■□□□□ 0.26
SCML4Q8N228 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCML4Q8N228 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.69■□□□□ 0.26
SCML4Q8N228 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCML4Q8N228 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.69■□□□□ 0.26
SCML4Q8N228 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCML4Q8N228 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCML4Q8N228 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCML4Q8N228 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCML4Q8N228 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.69■□□□□ 0.26
SCML4Q8N228 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCML4Q8N228 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCML4Q8N228 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.69■□□□□ 0.26
SCML4Q8N228 FAM207CP-201ENST00000443486 507 ntBASIC16.69■□□□□ 0.26
SCML4Q8N228 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.69■□□□□ 0.26
SCML4Q8N228 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCML4Q8N228 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.69■□□□□ 0.26
SCML4Q8N228 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.69■□□□□ 0.26
SCML4Q8N228 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.69■□□□□ 0.26
SCML4Q8N228 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.69■□□□□ 0.26
SCML4Q8N228 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.69■□□□□ 0.26
SCML4Q8N228 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCML4Q8N228 CICP6-201ENST00000457191 2729 ntBASIC16.69■□□□□ 0.26
SCML4Q8N228 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SCML4Q8N228 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms