Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.88□□□□□ -0.03
COL27A1Q8IZC6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 MIR663B-201ENST00000408361 115 ntBASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 HSPB1P2-201ENST00000448722 546 ntBASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 AC018735.1-201ENST00000437208 1502 ntBASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL27A1Q8IZC6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 AL591846.1-201ENST00000451736 433 ntBASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 KRT8P13-201ENST00000463294 1010 ntBASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 MIR648-201ENST00000385046 94 ntBASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 FAM197Y7-201ENST00000432892 766 ntBASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL27A1Q8IZC6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 AC080080.1-201ENST00000625121 2420 ntBASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL27A1Q8IZC6 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms