Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 AC010654.1-201ENST00000615722 808 ntBASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 AD001527.2-201ENST00000622994 785 ntBASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LYSMD2Q8IV50 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 AL845331.1-201ENST00000424978 1190 ntBASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 AC139887.4-201ENST00000607877 719 ntBASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 HYMAI.1-201ENST00000620949 238 ntBASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 CICP8-201ENST00000455800 2813 ntBASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
LYSMD2Q8IV50 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 DGCR9-201ENST00000609630 2415 ntBASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 KRT18P38-201ENST00000449496 1282 ntBASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 YBX1P2-201ENST00000489612 999 ntBASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 AC145285.6-201ENST00000604632 637 ntBASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.22□□□□□ -0.13
LYSMD2Q8IV50 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms