Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LDB1Q86U70 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
LDB1Q86U70 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 LINC01225-203ENST00000563550 1244 ntBASIC16.15■□□□□ 0.18
LDB1Q86U70 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.15■□□□□ 0.18
LDB1Q86U70 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.15■□□□□ 0.18
LDB1Q86U70 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.15■□□□□ 0.18
LDB1Q86U70 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.15■□□□□ 0.18
LDB1Q86U70 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LDB1Q86U70 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.15■□□□□ 0.18
LDB1Q86U70 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.15■□□□□ 0.18
LDB1Q86U70 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.15■□□□□ 0.18
LDB1Q86U70 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.15■□□□□ 0.18
LDB1Q86U70 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.15■□□□□ 0.18
LDB1Q86U70 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.15■□□□□ 0.18
LDB1Q86U70 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
LDB1Q86U70 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LDB1Q86U70 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LDB1Q86U70 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
LDB1Q86U70 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 LINC00554-201ENST00000564841 3011 ntBASIC16.14■□□□□ 0.17
LDB1Q86U70 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.14■□□□□ 0.17
LDB1Q86U70 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 ELL2P1-201ENST00000413990 1906 ntBASIC16.14■□□□□ 0.17
LDB1Q86U70 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LDB1Q86U70 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LDB1Q86U70 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LDB1Q86U70 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LDB1Q86U70 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LDB1Q86U70 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.14■□□□□ 0.17
LDB1Q86U70 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LDB1Q86U70 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.14■□□□□ 0.17
LDB1Q86U70 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 HAUS4P1-201ENST00000406739 1145 ntBASIC16.14■□□□□ 0.17
LDB1Q86U70 GPX1P2-201ENST00000429271 606 ntBASIC16.14■□□□□ 0.17
LDB1Q86U70 MKNK2P1-201ENST00000437526 628 ntBASIC16.14■□□□□ 0.17
LDB1Q86U70 RN7SL589P-201ENST00000481268 310 ntBASIC16.14■□□□□ 0.17
LDB1Q86U70 AC112482.1-201ENST00000492080 688 ntBASIC16.14■□□□□ 0.17
LDB1Q86U70 AC098859.1-201ENST00000502915 1238 ntBASIC16.14■□□□□ 0.17
LDB1Q86U70 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LDB1Q86U70 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.14■□□□□ 0.17
LDB1Q86U70 AP000842.3-202ENST00000569238 1080 ntBASIC16.14■□□□□ 0.17
LDB1Q86U70 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 AC005829.1-201ENST00000570002 483 ntBASIC16.14■□□□□ 0.17
LDB1Q86U70 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.14■□□□□ 0.17
LDB1Q86U70 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.14■□□□□ 0.17
LDB1Q86U70 MIR4321-201ENST00000592276 80 ntBASIC16.14■□□□□ 0.17
LDB1Q86U70 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.14■□□□□ 0.17
LDB1Q86U70 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LDB1Q86U70 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LDB1Q86U70 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.14■□□□□ 0.17
LDB1Q86U70 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.14■□□□□ 0.17
LDB1Q86U70 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LDB1Q86U70 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.14■□□□□ 0.17
LDB1Q86U70 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.13■□□□□ 0.17
LDB1Q86U70 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
LDB1Q86U70 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 AC134407.2-201ENST00000625089 1978 ntBASIC16.13■□□□□ 0.17
LDB1Q86U70 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.13■□□□□ 0.17
LDB1Q86U70 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.13■□□□□ 0.17
LDB1Q86U70 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.13■□□□□ 0.17
LDB1Q86U70 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.13■□□□□ 0.17
LDB1Q86U70 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LDB1Q86U70 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.13■□□□□ 0.17
LDB1Q86U70 AC069335.1-201ENST00000489972 472 ntBASIC16.13■□□□□ 0.17
LDB1Q86U70 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.13■□□□□ 0.17
LDB1Q86U70 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms