Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 INTS4P2-202ENST00000614726 2019 ntBASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 FNTAP2-201ENST00000430308 634 ntBASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 FAM197Y7-201ENST00000432892 766 ntBASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 AC005252.2-201ENST00000624630 1141 ntBASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 RHOXF1P1-202ENST00000635473 501 ntBASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 AC026410.3-201ENST00000514280 936 ntBASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13BQ7Z7G8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC9.77□□□□□ -0.84
VPS13BQ7Z7G8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
VPS13BQ7Z7G8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.84
VPS13BQ7Z7G8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
VPS13BQ7Z7G8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
VPS13BQ7Z7G8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
VPS13BQ7Z7G8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.84
VPS13BQ7Z7G8 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 MPRIPP1-201ENST00000452433 1089 ntBASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 AC025279.2-201ENST00000569730 653 ntBASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 IGF1-203ENST00000392904 761 ntTSL 5 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 SPTLC1P5-201ENST00000450718 252 ntBASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 AC104306.2-201ENST00000451877 341 ntBASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 AC078819.1-201ENST00000547454 765 ntBASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 AC012085.1-201ENST00000548270 765 ntBASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 MIR3907-201ENST00000579424 151 ntBASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 AL096828.3-201ENST00000615354 462 ntBASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 HARS-202ENST00000415192 1401 ntTSL 2 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 SCARNA20.5-201ENST00000516991 142 ntBASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
VPS13BQ7Z7G8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
VPS13BQ7Z7G8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms