Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 FAM197Y7-201ENST00000432892 766 ntBASIC11.03□□□□□ -0.64
CSMD3Q7Z407 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 MPRIPP1-201ENST00000452433 1089 ntBASIC11.03□□□□□ -0.64
CSMD3Q7Z407 APOA2-204ENST00000464492 530 ntTSL 3 BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 AC000095.1-201ENST00000603208 874 ntBASIC11.03□□□□□ -0.64
CSMD3Q7Z407 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CSMD3Q7Z407 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CSMD3Q7Z407 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CSMD3Q7Z407 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CSMD3Q7Z407 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC11.02□□□□□ -0.64
CSMD3Q7Z407 FO393414.2-201ENST00000405153 598 ntBASIC11.02□□□□□ -0.64
CSMD3Q7Z407 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
CSMD3Q7Z407 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CSMD3Q7Z407 AC005077.2-201ENST00000449786 690 ntBASIC11.02□□□□□ -0.64
CSMD3Q7Z407 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CSMD3Q7Z407 RNF41-210ENST00000552244 716 ntTSL 3 BASIC11.02□□□□□ -0.64
CSMD3Q7Z407 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC11.02□□□□□ -0.64
CSMD3Q7Z407 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
CSMD3Q7Z407 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CSMD3Q7Z407 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC11.02□□□□□ -0.64
CSMD3Q7Z407 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC11.02□□□□□ -0.64
CSMD3Q7Z407 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CSMD3Q7Z407 AGER-206ENST00000375070 1463 ntTSL 5 BASIC11.02□□□□□ -0.64
CSMD3Q7Z407 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CSMD3Q7Z407 REXO1L1P-202ENST00000608646 1974 ntBASIC11.02□□□□□ -0.64
CSMD3Q7Z407 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CSMD3Q7Z407 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CSMD3Q7Z407 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 HNRNPA1P32-201ENST00000396326 963 ntBASIC11.02□□□□□ -0.65
CSMD3Q7Z407 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 CFL1-214ENST00000534769 758 ntTSL 2 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 FGFR3P5-201ENST00000564496 886 ntBASIC11.02□□□□□ -0.65
CSMD3Q7Z407 AC093813.1-201ENST00000605066 256 ntBASIC11.02□□□□□ -0.65
CSMD3Q7Z407 U62317.3-201ENST00000608319 855 ntBASIC11.02□□□□□ -0.65
CSMD3Q7Z407 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CSMD3Q7Z407 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CSMD3Q7Z407 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CSMD3Q7Z407 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CSMD3Q7Z407 SERPINA13P-202ENST00000478994 924 ntBASIC11.01□□□□□ -0.65
CSMD3Q7Z407 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CSMD3Q7Z407 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CSMD3Q7Z407 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CSMD3Q7Z407 VILL-207ENST00000465644 1857 ntTSL 5 BASIC11.01□□□□□ -0.65
CSMD3Q7Z407 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CSMD3Q7Z407 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms