Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 AP001282.1-201ENST00000531301 1499 ntBASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE3BQ7Z3V4 AC063926.2-201ENST00000623766 1308 ntBASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 AC007431.3-201ENST00000623221 587 ntBASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 AL391825.1-201ENST00000457671 1364 ntBASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE3BQ7Z3V4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBE3BQ7Z3V4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.02■□□□□ 0.79
UBE3BQ7Z3V4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
UBE3BQ7Z3V4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBE3BQ7Z3V4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBE3BQ7Z3V4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBE3BQ7Z3V4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 AC074338.1-201ENST00000416825 156 ntBASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 NME2P1-201ENST00000426182 414 ntBASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 AC055876.2-201ENST00000531834 546 ntBASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
UBE3BQ7Z3V4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
UBE3BQ7Z3V4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms