Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 HTR5BP-201ENST00000430851 1154 ntBASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 ACTG1P14-201ENST00000446382 1122 ntBASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 YBX1P5-201ENST00000509441 847 ntBASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 PRYP6-201ENST00000514804 343 ntBASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 KRT8P48-201ENST00000515599 1220 ntBASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 FAM86C2P-203ENST00000528684 1004 ntBASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 AL135744.1-201ENST00000565098 629 ntBASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 AC126177.1-201ENST00000547829 2218 ntBASIC14.56□□□□□ -0.08
NHLRC1Q6VVB1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 ALG1L5P-201ENST00000482043 771 ntBASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 AC008267.7-201ENST00000624570 1194 ntBASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 AC008677.1-201ENST00000519230 1561 ntBASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NHLRC1Q6VVB1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms