Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 AC007064.4-201ENST00000637740 555 ntBASIC16.55■□□□□ 0.24
CASC4Q6P4E1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 AC069224.1-201ENST00000566372 1715 ntBASIC16.55■□□□□ 0.24
CASC4Q6P4E1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CASC4Q6P4E1 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 KRT18P34-201ENST00000488218 1270 ntBASIC16.54■□□□□ 0.24
CASC4Q6P4E1 RNA5SP419-201ENST00000515908 135 ntBASIC16.54■□□□□ 0.24
CASC4Q6P4E1 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 SLC25A6P4-201ENST00000586535 553 ntBASIC16.54■□□□□ 0.24
CASC4Q6P4E1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 AL009183.1-201ENST00000603760 355 ntBASIC16.54■□□□□ 0.24
CASC4Q6P4E1 Z83851.2-201ENST00000609564 659 ntBASIC16.54■□□□□ 0.24
CASC4Q6P4E1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 AC092919.2-201ENST00000623631 1645 ntBASIC16.54■□□□□ 0.24
CASC4Q6P4E1 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CASC4Q6P4E1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CASC4Q6P4E1 TPM4P1-201ENST00000436100 807 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms