Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PPP4R4Q6NUP7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PPP4R4Q6NUP7 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
PPP4R4Q6NUP7 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PPP4R4Q6NUP7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.58■□□□□ 0.09
PPP4R4Q6NUP7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.58■□□□□ 0.09
PPP4R4Q6NUP7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PPP4R4Q6NUP7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 AC006486.2-201ENST00000624246 2199 ntBASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 AC018712.1-201ENST00000455767 687 ntBASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 AC139887.3-201ENST00000568585 713 ntBASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 MIR7706-201ENST00000613747 67 ntBASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 FAM215A-202ENST00000632077 792 ntBASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 PRAL-201ENST00000624952 3286 ntBASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PPP4R4Q6NUP7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 LAGE3P1-201ENST00000425356 484 ntBASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 NCF1C-201ENST00000438382 1427 ntBASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 SIGLEC16-201ENST00000599858 1437 ntBASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 KRT8P49-201ENST00000604166 1432 ntBASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.57■□□□□ 0.08
PPP4R4Q6NUP7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PPP4R4Q6NUP7 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.56■□□□□ 0.08
PPP4R4Q6NUP7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PPP4R4Q6NUP7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PPP4R4Q6NUP7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
PPP4R4Q6NUP7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PPP4R4Q6NUP7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.56■□□□□ 0.08
PPP4R4Q6NUP7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.56■□□□□ 0.08
PPP4R4Q6NUP7 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
PPP4R4Q6NUP7 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms