Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 AP001059.3-201ENST00000619053 235 ntBASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 AL136379.1-201ENST00000623471 2642 ntBASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CCDC144NLQ6NUI1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 CYP2T1P-202ENST00000641596 2535 ntBASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
CCDC144NLQ6NUI1 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 AP3S2-216ENST00000617003 1561 ntBASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 CNN2P2-201ENST00000443536 909 ntBASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 CNN2P3-201ENST00000450201 906 ntBASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 AL512356.2-201ENST00000546955 174 ntBASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 AC093520.2-201ENST00000561830 333 ntBASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 AC004449.1-201ENST00000564240 433 ntBASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 AC018529.1-201ENST00000613063 361 ntBASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.12□□□□□ -0.31
CCDC144NLQ6NUI1 AL136317.3-201ENST00000618497 906 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms