Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 AC011477.6-201ENST00000604980 1927 ntBASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 ATP5G2P1-201ENST00000433580 426 ntBASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 RPS15P9-201ENST00000494093 319 ntBASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 AC006557.2-201ENST00000592985 1240 ntBASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 AC021097.1-201ENST00000607902 574 ntBASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 AL009178.2-201ENST00000597278 2719 ntBASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 PCDHA3-202ENST00000532566 4594 ntBASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC00242Q5T6M2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
LINC00242Q5T6M2 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.08□□□□□ -0.63
LINC00242Q5T6M2 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 NMU-205ENST00000511469 756 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 AC087388.1-201ENST00000571370 1112 ntBASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 AP000550.4-202ENST00000639755 178 ntBASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00242Q5T6M2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms