Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC078925.2-201ENST00000624013 1973 ntBASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTC1Q2NKJ3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 AC092068.3-201ENST00000587894 2016 ntBASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 CROCCP4-201ENST00000457096 498 ntBASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 AC104989.1-201ENST00000519711 778 ntBASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 RRP7BP-205ENST00000566851 833 ntBASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 AC015936.2-201ENST00000593177 259 ntBASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 AL513477.1-201ENST00000602865 2407 ntBASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTC1Q2NKJ3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 MIR6869-201ENST00000619434 62 ntBASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.22■□□□□ 0.35
CTC1Q2NKJ3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms