Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PDS5AQ29RF7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 GIMAP3P-201ENST00000495150 836 ntBASIC19.18■□□□□ 0.66
PDS5AQ29RF7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 BRI3BPP1-201ENST00000594224 787 ntBASIC19.18■□□□□ 0.66
PDS5AQ29RF7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 AC000095.1-201ENST00000603208 874 ntBASIC19.18■□□□□ 0.66
PDS5AQ29RF7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PDS5AQ29RF7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 AL596087.1-201ENST00000400979 1969 ntBASIC19.17■□□□□ 0.66
PDS5AQ29RF7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 AC104596.2-201ENST00000512793 793 ntBASIC19.17■□□□□ 0.66
PDS5AQ29RF7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 AC106886.1-201ENST00000568660 600 ntBASIC19.17■□□□□ 0.66
PDS5AQ29RF7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDS5AQ29RF7 CLK3P2-201ENST00000427566 1453 ntBASIC19.16■□□□□ 0.66
PDS5AQ29RF7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 AL607033.1-201ENST00000623900 1599 ntBASIC19.16■□□□□ 0.66
PDS5AQ29RF7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 RN7SL837P-201ENST00000463010 287 ntBASIC19.16■□□□□ 0.66
PDS5AQ29RF7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDS5AQ29RF7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.15■□□□□ 0.66
PDS5AQ29RF7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 AC069224.1-201ENST00000566372 1715 ntBASIC19.15■□□□□ 0.66
PDS5AQ29RF7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDS5AQ29RF7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms