Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH17Q12864 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDH17Q12864 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
CDH17Q12864 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH17Q12864 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
CDH17Q12864 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.33■□□□□ 0.21
CDH17Q12864 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.33■□□□□ 0.21
CDH17Q12864 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH17Q12864 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH17Q12864 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH17Q12864 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH17Q12864 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH17Q12864 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH17Q12864 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH17Q12864 MKNK2P1-201ENST00000437526 628 ntBASIC16.33■□□□□ 0.2
CDH17Q12864 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH17Q12864 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDH17Q12864 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDH17Q12864 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CDH17Q12864 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CDH17Q12864 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDH17Q12864 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH17Q12864 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH17Q12864 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CDH17Q12864 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH17Q12864 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH17Q12864 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH17Q12864 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH17Q12864 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH17Q12864 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH17Q12864 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CDH17Q12864 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH17Q12864 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CDH17Q12864 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH17Q12864 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH17Q12864 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH17Q12864 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH17Q12864 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH17Q12864 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH17Q12864 NFIC-211ENST00000641145 8399 ntBASIC16.32■□□□□ 0.2
CDH17Q12864 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH17Q12864 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH17Q12864 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH17Q12864 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH17Q12864 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH17Q12864 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH17Q12864 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CDH17Q12864 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH17Q12864 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH17Q12864 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH17Q12864 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH17Q12864 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH17Q12864 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH17Q12864 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH17Q12864 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH17Q12864 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH17Q12864 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.32■□□□□ 0.2
CDH17Q12864 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH17Q12864 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH17Q12864 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH17Q12864 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH17Q12864 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDH17Q12864 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH17Q12864 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH17Q12864 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH17Q12864 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDH17Q12864 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH17Q12864 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH17Q12864 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH17Q12864 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH17Q12864 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH17Q12864 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH17Q12864 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH17Q12864 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDH17Q12864 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CDH17Q12864 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDH17Q12864 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDH17Q12864 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH17Q12864 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH17Q12864 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH17Q12864 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH17Q12864 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH17Q12864 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDH17Q12864 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CDH17Q12864 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH17Q12864 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDH17Q12864 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH17Q12864 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH17Q12864 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH17Q12864 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH17Q12864 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH17Q12864 MIR346-201ENST00000362234 95 ntBASIC16.31■□□□□ 0.2
CDH17Q12864 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH17Q12864 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH17Q12864 FAM220BP-201ENST00000377689 816 ntBASIC16.31■□□□□ 0.2
CDH17Q12864 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH17Q12864 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.31■□□□□ 0.2
CDH17Q12864 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH17Q12864 SPCS2P4-201ENST00000436160 681 ntBASIC16.31■□□□□ 0.2
CDH17Q12864 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms