Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 PRYP6-201ENST00000514804 343 ntBASIC15.6■□□□□ 0.09
HMGCS1Q01581 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 PDPK2P-202ENST00000562415 1191 ntBASIC15.6■□□□□ 0.09
HMGCS1Q01581 AP002472.1-201ENST00000577490 586 ntBASIC15.6■□□□□ 0.09
HMGCS1Q01581 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 AC092865.6-201ENST00000642101 219 ntBASIC15.6■□□□□ 0.09
HMGCS1Q01581 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCS1Q01581 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCS1Q01581 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCS1Q01581 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCS1Q01581 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCS1Q01581 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCS1Q01581 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCS1Q01581 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCS1Q01581 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCS1Q01581 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCS1Q01581 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCS1Q01581 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCS1Q01581 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCS1Q01581 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 AC002347.1-201ENST00000569543 541 ntBASIC15.59■□□□□ 0.09
HMGCS1Q01581 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 AL161645.1-201ENST00000622716 1255 ntBASIC15.59■□□□□ 0.09
HMGCS1Q01581 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCS1Q01581 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCS1Q01581 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 PMS2P7-201ENST00000506558 1336 ntBASIC15.59■□□□□ 0.09
HMGCS1Q01581 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCS1Q01581 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCS1Q01581 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCS1Q01581 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCS1Q01581 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCS1Q01581 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCS1Q01581 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCS1Q01581 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCS1Q01581 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCS1Q01581 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.59■□□□□ 0.09
HMGCS1Q01581 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HMGCS1Q01581 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.09
HMGCS1Q01581 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.58■□□□□ 0.09
HMGCS1Q01581 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
HMGCS1Q01581 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
HMGCS1Q01581 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HMGCS1Q01581 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.58■□□□□ 0.09
HMGCS1Q01581 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HMGCS1Q01581 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
HMGCS1Q01581 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.58■□□□□ 0.09
HMGCS1Q01581 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCS1Q01581 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCS1Q01581 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCS1Q01581 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCS1Q01581 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCS1Q01581 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCS1Q01581 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCS1Q01581 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCS1Q01581 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 AC099522.2-201ENST00000607001 744 ntBASIC15.58■□□□□ 0.08
HMGCS1Q01581 AL365330.1-201ENST00000607459 531 ntBASIC15.58■□□□□ 0.08
HMGCS1Q01581 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms