Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.04□□□□□ -0.16
UBA52P62987 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
UBA52P62987 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.04□□□□□ -0.16
UBA52P62987 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.04□□□□□ -0.16
UBA52P62987 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.04□□□□□ -0.16
UBA52P62987 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.04□□□□□ -0.16
UBA52P62987 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.04□□□□□ -0.16
UBA52P62987 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.04□□□□□ -0.16
UBA52P62987 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 COX5BP2-201ENST00000392354 334 ntBASIC14.04□□□□□ -0.16
UBA52P62987 AC254562.1-201ENST00000417586 456 ntBASIC14.04□□□□□ -0.16
UBA52P62987 VN2R19P-201ENST00000442399 1052 ntBASIC14.04□□□□□ -0.16
UBA52P62987 AC108073.2-201ENST00000464002 357 ntBASIC14.04□□□□□ -0.16
UBA52P62987 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.04□□□□□ -0.16
UBA52P62987 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.04□□□□□ -0.16
UBA52P62987 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.04□□□□□ -0.16
UBA52P62987 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.04□□□□□ -0.16
UBA52P62987 OR2I1P-210ENST00000642037 4691 ntBASIC14.04□□□□□ -0.16
UBA52P62987 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 NCF1C-201ENST00000438382 1427 ntBASIC14.04□□□□□ -0.16
UBA52P62987 AP002414.2-201ENST00000591780 3365 ntBASIC14.04□□□□□ -0.16
UBA52P62987 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 BX276092.7-203ENST00000637198 1536 ntBASIC14.04□□□□□ -0.16
UBA52P62987 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.04□□□□□ -0.16
UBA52P62987 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.04□□□□□ -0.16
UBA52P62987 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.04□□□□□ -0.16
UBA52P62987 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
UBA52P62987 AC006504.4-201ENST00000592118 1568 ntBASIC14.04□□□□□ -0.16
UBA52P62987 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
UBA52P62987 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.04□□□□□ -0.16
UBA52P62987 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBA52P62987 AL391256.1-201ENST00000443260 1855 ntBASIC14.04□□□□□ -0.16
UBA52P62987 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 ME2P1-201ENST00000426028 1970 ntBASIC14.03□□□□□ -0.16
UBA52P62987 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 AC023157.3-201ENST00000619086 2088 ntBASIC14.03□□□□□ -0.16
UBA52P62987 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.03□□□□□ -0.16
UBA52P62987 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UBA52P62987 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.03□□□□□ -0.16
UBA52P62987 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.03□□□□□ -0.16
UBA52P62987 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.03□□□□□ -0.16
UBA52P62987 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
UBA52P62987 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UBA52P62987 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.03□□□□□ -0.16
UBA52P62987 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
UBA52P62987 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.03□□□□□ -0.16
UBA52P62987 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
UBA52P62987 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.03□□□□□ -0.16
UBA52P62987 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.03□□□□□ -0.16
UBA52P62987 C20orf181-201ENST00000623918 480 ntBASIC14.03□□□□□ -0.16
UBA52P62987 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.03□□□□□ -0.16
UBA52P62987 AC092865.6-201ENST00000642101 219 ntBASIC14.03□□□□□ -0.16
UBA52P62987 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
UBA52P62987 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.03□□□□□ -0.16
UBA52P62987 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
UBA52P62987 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.03□□□□□ -0.16
UBA52P62987 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
UBA52P62987 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UBA52P62987 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.03□□□□□ -0.16
UBA52P62987 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.03□□□□□ -0.16
UBA52P62987 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
UBA52P62987 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBA52P62987 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.03□□□□□ -0.16
UBA52P62987 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms